GenElute™ Bacterial Genomic DNA Kit

DNA isolation / purification Bacteria - Gram negative E.coli

Experiment
DNA isolation / purification Bacteria - Gram negative E.coli
Product
GenElute™ Bacterial Genomic DNA Kit from Sigma-Aldrich
Manufacturer
Sigma-Aldrich

Protocol tips

Upstream tips
Examine reagents for precipitation. If any reagent forms a precipitate, warm at 55–65 °C until the precipitate dissolves and cool to room temperature before use.

Publication protocol

Genomic analysis
Bacterial DNA was extracted from 1-day old cultures of selected strains using GenElute™ bacterial genome kit (Sigma Aldrich®, USA). The genome sequences were generated on an Illumina MiSeq using v3 chemistry and 300 bp paired end reads using dual indexed Nextera XT libraries. The de novo assembly was performed using SPAdes assembly program and Quast [32]. Genome annotation used the SEED-based automated annotation system provided by the RAST server (http://rast.nmpdr.org) and prokaryotic genome annotation system PROKKA [33].

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Papers

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Paper title
The molecular characterisation of K1 isolated from neonatal nasogastric feeding tubes
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Manufacturer protocol

Download the product protocol from Sigma-Aldrich for GenElute™ Bacterial Genomic DNA Kit below.

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