QIAquick Gel Extraction Kit

DNA gel extraction / PCR product purification Product size < 15Kb

Experiment
DNA gel extraction / PCR product purification Product size < 15Kb
Product
QIAquick Gel Extraction Kit from Qiagen
Manufacturer
Qiagen

Protocol tips

Upstream tips
The amount of agarose
excised from the gel should
be as small as possible.
Protocol tips
Remove the flow-through
by aspiration. Avoid
contamination of the
collection tube rim.

Publication protocol

Total RNA was extracted from whole bodies of the No. 1 larvae (n = 5) using ISOGEN (NipponGene, Tokyo, Japan). The extracted RNA was purified by DNase treatment to remove genomic DNA. RNA purity and quantity were measured using a NanoVue spectrophotometer (GE Healthcare BioSciences, Tokyo, Japan). The purified RNA (2 µg) was reverse-transcribed for cDNA synthesis using a High-Capacity cDNA Reverse Transcription Kit (Applied Biosystems, Foster, CA, USA). ZnNLaz1 gene-specific primers, to amplify the ORF and 5′ and 3′ UTR regions, were newly designed based on de novo assembled sequences obtained using Primer3Plus [19] (electronic supplementary material, table S1). PCR products were purified using a QIAquick Gel Extraction Kit (Qiagen, Tokyo, Japan), and subcloned into a pGEM easy T-vector (Promega, Madison, WI, USA). The inserted DNA sequence was amplified by PCR, and purified products were sequenced using a BigDye Terminator v. 3.1 Cycle Sequencing Kit and an automatic DNA Sequencer 3130 Genetic Analyzer (Applied Biosystems). Obtained sequences were subjected to BLAST database searches. The determined nucleotide and putative amino acid sequences are available at DDBJ/EMBL/GenBank databases (accession no. LC382016). NLaz homologues in other insects were obtained from the NCBI database, and molecular phylogenetic analyses were performed (see the electronic supplementary material)

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Manufacturer protocol

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