siRNA / miRNA gene silencing Human Min-6

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Protein ladders are a set of standards known as molecular weight proteins that are utilized to identify the approximate size of a protein molecule run on a PAGE gel electrophoresis. The challenges in running the ladders are the choice of appropriate protein standard as it is used as visual evidence of protein migration, transfer efficiency, and positive control. Suitable protein markers can be selected on the basis of required properties and applications, i.e., fluorescent ladder, IEF, 2D SDS-PAGE ladder, natural ladder with an isoelectric point, and optimized ladders for Western Blot chemiluminescence detection. The key factors for running a distinct protein ladder are buffer conditions, charge/voltage at migration time, and the gel's concentration.

Proteins Protein Ladder IEF and 2-D Standards

Get tips on using Hoechst 33342 to perform Necrosis MIA PaCa-2

Products Thermo Fisher Scientific Hoechst 33342

Get tips on using RNAprotect Bacteria Reagent to perform RNA stabilization Microbial

Products Qiagen RNAprotect Bacteria Reagent

A restriction enzyme or restriction endonuclease is defined as a protein that recognizes a specific, short nucleotide sequence and cuts the DNA only at or near that site, known as restriction site or target sequence. The four most common types of restriction enzymes include: Type I (cleaves at sites remote from a recognition site), Type II (cleaves within or at short specific distances from a recognition site), Type III (cleave at sites a short distance from a recognition site), and Type IV (targets modified DNA- methylated, hydroxymethylated and glucosyl-hydroxymethylated DNA). The most common challenges with restriction digest include- 1. inactivation of the enzyme, 2. incomplete or no digestion, and 3. unexpected cleavage. The enzyme should always be stored at -20C and multiple freeze-thaw cycles should be avoided in order to maintain optimal activity. Always use a control DNA digestion with the enzyme to ensure adequate activity (to avoid interference due to high glycerol in the enzyme). For complete digestion, make sure that the enzyme volume is 1/10th of the total reaction volume, the optimal temperature is constantly maintained throughout the reaction, the total reaction time is appropriately calculated based on the amount of DNA to be digested, appropriate buffers should be used to ensure maximal enzymatic activity, and in case of a double digest, make sure that the two restriction sites are far enough so that the activity of one enzyme cannot interfere with the activity of the other. Star activity (or off-target cleavage) and incomplete cleavage are potential challenges which may occur due to suboptimal enzymatic conditions or inappropriate enzyme storage. To avoid these, follow the recommended guidelines for storage and reactions, and always check for the efficacy of digestion along with purification of digested products on an agarose gel.

Proteins Restriction Enzymes MfeI / MunI

Get tips on using SPLInsert™ Hanging to perform Cell migration / Invasion cell type - HaCat

Products SPL Life Sciences SPLInsert™ Hanging

Get tips on using Fluoro hROS to perform ROS assay cell type - MiaPaCa-2 pancreatic carcinoma

Products Cell Technology Fluoro hROS

Get tips on using LifeGuard Soil Preservation (1000 ml) to perform RNA stabilization Microbial

Products Qiagen LifeGuard Soil Preservation (1000 ml)

Get tips on using Annexin V-FITC Apoptosis Kit to perform Necrosis MIA PaCa-2

Products Biovision Annexin V-FITC Apoptosis Kit

Get tips on using Apoptosis and Necrosis Quantification Kit to perform Necrosis MIA PaCa-2

Products Biotium Apoptosis and Necrosis Quantification Kit
DMEM/F-12 Product

Get tips on using DMEM/F-12 to perform 3D Cell Culture Media hiPSC-derived midbrain organoids

Products Thermo Fisher Scientific DMEM/F-12

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