pSpCas9(BB)-2A-GFP (PX458)

CRISPR Rat - Deletion AR42J Atg12

Experiment
CRISPR Rat - Deletion AR42J Atg12
Product
pSpCas9(BB)-2A-GFP (PX458) from Addgene
Manufacturer
Addgene

Protocol tips

Upstream tips
To access a plasmid, keep the plate on dry ice to prevent thawing. Using a sterile pipette tip (20uL or 200uL one), puncture the seal above an individual well and spread a portion of the glycerol stock onto an agar plate.

Publication protocol

2.2. Establishment of KO Cell Lines
CRISPR guide RNAs (gRNA) sequence targeting each gene were cloned into pX458 [26]. CRISPR Design (http://crispr.mit.edu/) was used to design the gRNA. A sequence with no high-scoring off-targets was selected. The selected target sequences were human ATG12- GGCTCCGGGGTGGTTGTTTC, rat ATG12- CCGGGAGGTTCCTCCGTAC, and rat amylase- AGTAATGTCAAGTTACCGATGGG. The primers used for cloning were human ATG12- 5′- CACCGGCTCCGGGGTGGTTGTTTC-3′ and 5′-AAAC GAAACAACCACCCCGGAGCC-3′, rat ATG12- 5′-CACCG CCGGGAGGTTCCTCCGTACC-3′ and 5′-AAACGGTACGGAGGAACCTCCCGGC-3′, and rat amylase- 5′-CACCGAGTAATGTCAAGTTACCGAT-3′ and 5′-AAACATCGGTAACTTGACATTACTC-3′.

MIA PaCa-2 and AR42J were transfected with pX458 with the above gRNAs inserted using Lipofectamine 2000 (Thermo Fisher). After 48 h, green fluorescent protein positive cells were isolated using a cell sorter (BD FACSARIA 3; BD Biosciences, Franklin Lakes, NJ, USA) and single clones were obtained. Clones with mutations in both alleles were identified by immunoblotting and confirmed by sequencing of genomic DNA.



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Papers

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Manufacturer protocol

Download the product protocol from Addgene for pSpCas9(BB)-2A-GFP (PX458) below.

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