Anti-LC3B antibody produced in rabbit

Autophagy assay cell type - Paneth cells

Experiment
Autophagy assay cell type - Paneth cells
Product
Anti-LC3B antibody produced in rabbit from Sigma-Aldrich
Manufacturer
Sigma-Aldrich

Protocol tips

Protocol tips
Incubate primary Ab with agitation for 1 hour.

Publication protocol

To confirm the absence of the Atg16L1 protein, impairment in autophagy and lysozyme quantification, specific protein expression was analysed by immunoblotting. On day 8 post crypt isolation, normally differentiated or Paneth enriched organoid pellets were lysed in m-PER lysisbuffer (ThermoFisher Scientific) containing protease inhibitor cocktail (Roche). 3-30µg protein per well was separated using NuPAGE precast 4-12% polyacrylamide gel system (ThermoFisher Scientific). Immunoblotting was carried out using an X-Cell II blot module (ThermoFisher Scientific) onto polyvinylidene (PVDF) membranes (ThermoFisher Scientific). Membranes were probed for ATG16L1 (Abgent), LC3II (Sigma), β-actin (Sigma) and lysozyme (Dako) and protein bands visualized using Odyssey infrared imaging system (Li-Cor) at 700nm and 800 nm. Densitometry of lysozyme bands was performed using the FIJI/ImageJ package an expressed as arbitrary units (AU) from at least 3 biological replicates for each group.

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Manufacturer protocol

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