NdeI NEB#R0111

Protocol tips

Upstream tips	Protocol tips	Downstream tips
	PCR products were digested with NdeI, ApaLI, and AccI (NEB) at 37°C, ethanol-precipitated, and run on denaturing polyacrylamide gels as described in ref. 15.

Protocol tips
PCR products were digested with NdeI, ApaLI, and AccI (NEB) at 37°C, ethanol-precipitated, and run on denaturing polyacrylamide gels as described in ref. 15.

Publication protocol

Superscript II (Invitrogen) reverse transcription reactions, performed according to the supplied protocol, contained 5–10 μg of RNA and reverse primer GAATTCTAACCCCTGTGCTAGCGCTT for tissue culture experiments or a nested primer, ATGCTTTCAAGCATCTGACCTAACC, for mouse experiments. In all cases, 20% of the reverse transcription reaction was PCR-amplified by using Taq (Qiagen, Valencia, CA) with sense primer GAATTCCCAGACGTCGCTGCATGC and antisense primer GAATTCTAACCCCTGTGCTAGCGCTT. The sense primer was end-labeled by using T4 polynucleotide kinase (NEB, Beverly, MA) and was used at a 1:5 ratio with the unlabeled sense primer (15). PCR products were digested with NdeI, ApaLI, and AccI (NEB) at 37°C, ethanol-precipitated, and run on denaturing polyacrylamide gels as described in ref. 15.

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