Publication protocol
"Carbenicillin was used in place of ampicillin in all cultures. All optical density at 600 nm (OD600) measurements were recorded on a Tecan Sunrise plate reader instrument (Männedorf, Switzerland) with 200 µL of culture in a standard 96-well plate.
For E expression experiments, E. coli cells were pre-cultured from single colonies in 5 mL of LB supplemented with appropriate antibiotic(s) at 25 °C for 16 h. Cells were then diluted into 10 mL of LB supplemented with appropriate antibiotic(s) to an initial OD600 of 0.03 in a 50-mL flask and were cultured at 30 °C and 220 rpm. Isopropyl β-d-1-thiogalactopyranoside (IPTG) was added to the cultures to a final concentration of 0.5 mM at the start of growth (t = −3 h) or once the cultures reached an OD600 of ~0.4 (t = 0) where indicated. Rhamnose was added to the cultures to final concentrations of 0.1, 0.2, or 0.5 mM once the cultures reached an OD600 of ~0.4.
For isolation of BMCs and purification of PduP-E, E. coli cells were pre-cultured from single colonies in 20 mL of LB supplemented with appropriate antibiotic(s) in a 250-mL flask at 25 °C for 16 h. Cells were then diluted into 200 mL of LB supplemented with appropriate antibiotic(s) to an initial OD600 of 0.03 in a 1-L flask. Cells were cultured at 30 °C and 220 rpm and harvested at 3 h post-rhamnose induction. All induction conditions with IPTG and rhamnose are the same as above."
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