FACS CD66b Mouse Human

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Short hairpin or small hairpin RNA (shRNA) is artificial RNA, which has a hairpin loop structure, and uses inherent microRNA (miRNA) machinery to silence target gene expression. This is called RNA interference (RNAi). These can be delivered via plasmids or viral/bacterial vectors. Challenges in shRNA-mediated gene silencing include: 1. Off-target silencing, 2. Packaging shRNA encoding lentivirus, and 3. Stable transduction in cells. RNAi have been designed to have anywhere from 19-27 bs, but the most effective design has 19 bp. In case commercial shRNAs are not available, potential target sites can be chosen within exon, 5’- or 3’ UTR, depending on which splice variants of the gene are desired. One should use the latest algorithms and choose at least two different sequences, targeting different regions, in order to have confidence in overcoming off-target effects. A BLAST search after selecting potential design will eliminate potential off-target sequences. For the second challenge, sequencing the vector using primers for either strand (50-100 bp upstream) is suggested, along with using enzymatic digestion on agarose gel for the vector. Next, once the shRNA-containing vector is packaged in a virus, it is important to check the viral titer before transduction. Finally, using a marker in the lentiviral vector (fluorescent protein or antibiotic resistance), along with qPCR for target gene expression can help in determining efficacy of transduction and shRNA on its target site.

RNA shRNA gene silencing Mouse Prostate cancer cell lines (DU145 and PC3) CD24 lentiviral particles

Get tips on using SurePrint Human miRNA Microarrays to perform Microarray Human - Endometrial stromal cells miRNA-expression array (labelled)

Products Agilent Technologies SurePrint Human miRNA Microarrays

Get tips on using CD14 Antibody, Pacific Orange™ conjugate to perform Flowcytometry CD14 - Mouse / IgG2a Human Pacific Orange™

Products Thermo Fisher Scientific CD14 Antibody, Pacific Orange™ conjugate

Get tips on using Human TAK1 Antibody to perform Western blotting Tak1

Products R&D Systems Human TAK1 Antibody

ROS has a very short half-lives in biological environment as they are influenced by exposure to ambient oxygen. As it is highly reactive and hard to measure care should be taken to ensure the stability of the sample during isolation, preparation, storage, and analysis.

Cellular assays ROS assay cell type A549 human adenocarcinomic human alveolar basal epithelial cells

Get tips on using Human VEGF ELISA Kit (ab100662) to perform ELISA Human - VEGF

Products Abcam Human VEGF ELISA Kit (ab100662)

Get tips on using Human VEGF 165b DuoSet ELISA to perform ELISA Human - VEGF

Products R&D Systems Human VEGF 165b DuoSet ELISA

Get tips on using Human Syndecan-1 DuoSet ELISA to perform ELISA Human - SDC1

Products R&D Systems Human Syndecan-1 DuoSet ELISA

Get tips on using Human RBP4 Quantikine ELISA Kit to perform ELISA Human - RBP4

Products R&D Systems Human RBP4 Quantikine ELISA Kit

Get tips on using Human Prolactin/PRL ELISA Kit to perform ELISA Human - PRL

Products Abcam Human Prolactin/PRL ELISA Kit

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